Disc 1
“Pilot”
Audio commentary #1: Paul Scheuring and Dominic Purcell
Audio commentary #2: Brett Ratner and Mark Helfrich
“Allen”
“Cell Test”
“Cute Poison”
Audio commentary #1: Paul Scheuring, Dominic Purcell and Wade Williams
Audio commentary #2: Matt Olmstead and Silas Weir Mitchell
Two Alternate Scenes
Disc 2
“English, Fritz or Percy”
“Riots, Drills and the Devil – Part I”
Audio commentary #1: Paul Scheuring, Dominic Purcell, Robert Knepper, Sarah Wayne Callies, Amaury Nolasco and Wade Williams
Audio commentary #2: Nick Santora and Bob Mandel
“Riots, Drills and the Devil – Part II”
Audio commentary: Paul Scheuring, Dominic Purcell, Wade Williams, Amaury Nolasco and Peter Stormare
“The Old Head”
Disc 3
“Tweener”
“Sleight Of Hand”
“And Then There Were Seven”
“Odd Man Out”
Audio commentary: Garry Brown, Karyn Usher and Bobby Roth
Disc 4
“End Of The Tunnel”
“The Rat”
“By The Skin And The Teeth”
“Brother’s Keeper”
Audio commentary #1: Paul Scheuring, Robert Knepper, Sarah Wayne Callies, Amaury Nolasco and Wade Williams
Audio commentary #2: Greg Yaitenes and Zach Estrin
Disc 5
“J-Cat”
“Bluff”
“The Key”
“Tonight”
Disc 6
“Go”
“Flight”
If These Walls Could Talk: Profile Of The Joliet Correctional Center featurette
Beyond The Ink featurette
Inside Look: “Prison Break – Manhunt”
